Heritability of human life span is ~50% when heritability is redefined
56 points
1 day ago
| 13 comments
| dynomight.net
| HN
pfisherman
2 hours ago
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One quick piece of semantic and linguistic housekeeping for the commenters…

Heritable != Molecular / Genetic Mechanism

There is a conflation of these terms in popular discourse that does a disservice to the field of statistical genetics, imo. There are mechanisms of inheritance that operate various length / time scales other than that of biological macromolecules. For example, if you tell me what language your parents natively speak I can tell you your primary language with >90% accuracy.

So before we start getting 3 replies deep into any thead, please remember that retrospective observational data measured with unqualified instruments is notoriously confounded and that we can barely infer causal structure in controlled functional genomics experiments (much less a GWAS of phewas). So let’s all please keep an open mind and not be so certain about our beliefs.

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fearmerchant
27 minutes ago
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This comment reads as if it were dropped into a generic "genetics of lifespan" thread,. The Dynomight article is already making a much more sophisticated version of some of these same points. The article's central argument is precisely that heritability is a contingent observational statistic, not a Platonic form. This particular article isn't conflating heritability with genetic mechanism at all. It's interrogating a simulation model and its assumptions. The warning about "unqualified instruments" and "retrospective observational data" feels off as this paper isn't a straightforward observational study. it's a parametric simulation fitted to twin registry data.

This comment might be very useful in a Reddit thread full of people saying "50% of lifespan is in your DNA," but it's a bit off-target as a response to this particular article.

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tptacek
14 minutes ago
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I think the comment is speaking to the thread, not responding to the author.
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svnt
1 hour ago
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The accurate version of the result would be something like: “if you model lifespan as aging + i.i.d. noise and dial the noise to zero, heritability of the aging component is ~40-50% in our model.” Which is barely a finding, since by construction reducing i.i.d. noise has to increase heritability of whatever non-noise remains.
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IshKebab
47 minutes ago
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> Heritable != Molecular / Genetic Mechanism

Hmm let me just check Wiktionary for "heritable"

> Genetically transmissible from parent to offspring

Ok then. Maybe it has some specific meaning in biology? A search for "heritable meaning in biology" let me to this page: https://www.cancer.gov/publications/dictionaries/cancer-term...

> In medicine, describes a characteristic or trait that can be passed from a parent to a child through the genes.

IMO this post is dumb and the paper is perfectly clear to non-pedants.

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tptacek
11 minutes ago
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The heritability statistic that occurs in the literature is the ratio of genetic variance to phenotypic variance.

Two corrollaries:

* When discussing heritability results from the literature, we are discussing that statistic, not your intuitive understanding of what the word should mean.

* In the scientific literature, your conception of heritability doesn't operate. In the scientific sense, the number of hands you have has low heritability, despite being genetically determined.

I think you're going to find "let's check Wiktionary" is not the decisive move in these kinds of discussions that it is elsewhere.

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IronyMan100
41 minutes ago
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I heared the same distinction as OP, but it is the other way around, it's the degree to what a trait is inherited from you parents which cannot be explained by the enviroment or Random Chance.
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coppsilgold
3 hours ago
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    > Almost all human traits are partly genetic and partly due to the environment and/or random. If you could change the world and reduce the amount of randomness, then of course heritability would go up.
There has been a lot of effort to determine systematic environmental factors that would influence things like intelligence and while it's easy to do harm (lead exposure) it's all but impossible to do any good.

It implies that the only environment that matters is either purely random (truly random accidents, circumstances) or non-systematic (results from non-linear interaction of environment and genes).

When stated that way it almost feels like a tautology because this is what genes exist to do in the first place. To control the interactions of their vessel and environment to the maximum degree. And from the perspective of an individual gene, all the other genes are part of the environment too.

    > There is no such thing as “true” heritability, independent of the contingent facts of our world.
It's uncomputable (need to run Monte Carlo simulations on a human life). All efforts are to approximate it.
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somenameforme
2 hours ago
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What you're saying is completely accurate, but I'd add that it's all relative. Are you falling towards the ground, or is the ground falling towards you? For instance malnutrition lowers IQ, in both directions. There is an inverse correlation between IQ and BMI, but what's most interesting is that that correlation has maintained just as strong even as obesity rates skyrocketed, which is suggestive that there's probably something causal, in some direction, somewhere in there.

And so in modern times if it turns out that eating less than most people apparently want to contributes to IQ, are you doing something good by eating less, or are they doing something bad by eating more? I think it's basically the same thing, just looked at in different ways.

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Earw0rm
2 hours ago
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Or are smarter people better able to regulate their food intake? (Either innately, or because society gives them other privileges which makes them less likely to overeat)
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lo_zamoyski
1 hour ago
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I would say, that on the whole, this has to do with habituated impulse control and self-restraint.

Classical writers speak of this as well, things like how inordinate and undisciplined appetites (not just for food, mind you; sex, too, and undue acquisitiveness of all sorts, for instance) darken the mind. What is inordinate and undisciplined is not proportioned or directed by reason. So, such character traits are rooted in fidelity to reason which means that not only do they avoid the aforementioned darkening of the mind by moderation of appetite, but the very character strength of being able to do so enables rational existence in other things.

Innate intelligence doesn't secure discipline. Indeed, it gives the person a bigger footgun and allows for more elaborate rationalizations of vice.

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bglazer
1 hour ago
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This is demonstrably untrue. IQ has increased consistently for decades, far faster than genetic factors can explain. Environmental factors like education, nutrition, and medical care are the obvious explanation.
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NooneAtAll3
54 minutes ago
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how does one separate "doing good" and "stop doing harm"?

I'd personally count nutrition squarely in the second category

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whatever1
57 minutes ago
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Also we are past that. Now IQ started decreasing.
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NooneAtAll3
52 minutes ago
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it's hard to separate IQ decreasing and return to mean with IQ stabilizing

in 20th century most of the world moved past famine and toxins - did any factor of similar scale happen in 21st century as well to start looking for opposite processes?

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PunchyHamster
18 minutes ago
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The people that have bad factors in IQ bred faster than ones that had good factors in IQ.

Birth rates drop the higher developer countries is and the growth of population in those (excluding mass migration) pretty much stopped and reversed

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pron
40 minutes ago
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> while it's easy to do harm (lead exposure) it's all but impossible to do any good.

That's just a meaningless statement no different from "while it's easy to subtract negative numbers, it's all but impossible to add positive numbers."

> or non-systematic (results from non-linear interaction of environment and genes).

Non-linear interaction does not mean non-systematic. Computer programs are fully deterministic (and therefore "systematic") while being non-linear (and therefore generally unpredictable). It is true to say that when things are non-linear it's hard to tell with certainty what effect some policy will have, but given that most human systems are non-linear, this is true for just about everything.

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ndr
42 minutes ago
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The standard biology formula for heritability is h = Var(genetic) / Var(phenotypic)

Which I bet is very useful for some kind of technical work, but it's amusingly confusing to lay people.

The author goes on to critique its misuses but the textbook example to make clear "heritability" is not as obvious as it sounds is that by this definition human bipedalism heritability is near zero because there's near zero variance.

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card_zero
11 minutes ago
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It's at odds with "heritable or not", the interesting question to us peasants. If there's a disease that gives you spots, we want to know if you can get it from your ma and pa. We don't want to know that nearly everybody hides the spots with makeup.

Then there's the matter of whether there's just a small population with the genes for it, and whether it's polygenic, or mitochondrial, or otherwise non-mendelian, and all that gets factored into this heritability value along with cultural things like the use of concealer and the probability of having your face torn off by a bear. It kind of reminds me of inflation, as a useful measure.

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cmrx64
38 minutes ago
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thinking about how to communicate it in a clear way. “the control knobs of what actually makes us different from one another” — you don’t expect one of your kids to be quadripedal. otoh this doesn’t really capture the precise notion either.
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arjie
2 hours ago
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Funny[0]. And cool. But I don’t think they mean:

> Heritability of human lifespan is about 50% when extrinsic mortality is adjusted to be closer to modern levels.

I think by “accounting for confounding factors” they mean setting extrinsic mortality to the equivalent of zero contribution. So you’d expect it to be the asymptote left side.

0: especially enjoyed talking about typos and then writing “doing to go”. I like little jokes like that.

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NooneAtAll3
57 minutes ago
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I did not understand what is meant by heritability

Why is it applied to twins if genes are inherited from parent to child?

How readhedness is 100%? I understand Mendel study in school is simplification, but you can get all sorts of gene mixes in kids

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edbaskerville
1 hour ago
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An evolutionary biology professor of mine—a renowned and outspoken if often inscrutable guy—liked to say, facetiously, "everything is 50% heritable." I think he was getting at something along these lines.
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svnt
2 hours ago
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The original paper and this post basically seem to agree on one point: in a scientific sense, the term heritability is hopelessly overloaded and as a result having a coherent discussion about the genetic and environment influences on phenotype/organism characteristics, including lifespan, is impossible with current terminology.
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card_zero
2 hours ago
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burnte
3 hours ago
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The world is only understood by nuance, and we're not great at that.
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psychoslave
1 hour ago
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In an other news, someone is always 100% right, when being right is redefined aptly.
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underlipton
2 hours ago
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The Dutch have been both the shortest and tallest population in Western Europe in the past 300 years. I've never found a satisfactory explanation for how this can be, if heritability figures for human height (and weight, and IQ, and-) are correct.

My intuition is that the average genetic human potential, for traits that are ostensibly hierarchical, is higher and narrower than is usually accepted - which is uncomfortable for those whose ambitions require, either directly or by incidence, that most people don't reach that potential. Or, that they're not actually hierarchical traits at all; value depends on context (and is generally made up).

Oddly, the former is probably preferable to most, since, "There is no inherent value in dying old versus young," probably doesn't track for most people.

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somenameforme
2 hours ago
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The belabored point of the article is that heritability isn't fixed. In the past there were highly variable rates of malnutrition which created a major environmental factor for height, as well as many other traits, which would reduce their heritability. But as malnutrition faded and most environmental factors that significantly affect height faded, differences in populations became increasingly determined by genetics, and so its heritability increased.
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lo_zamoyski
1 hour ago
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> I've never found a satisfactory explanation

You don't find better nutrition and sexual selection for height satisfactory?

> value depends on context (and is generally made up).

Value is not relative. It is objective, ontological, and teleological. Context only shifts situational value relevance, but the value itself remains as is.

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readthenotes1
3 hours ago
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"heritability depends on society"

Seems like the author is doing some redefining here like he's accusing the paper's author.

Perhaps the statement was meant to mean "fulfillment of hereditary characteristics change when society changes" but it wouldn't be that hard to say it if that's what it was supposed to be...

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pdar4123
2 hours ago
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Heritability is the proportion of variance in a trait that can be ascribed to genetics. So if you increase or decrease the total variance in the population u change heritability by definition. Eg. Split the pop in half and give one half less food - that half will be smaller (eg shorter in humans) and variance will increase thus the heritability will necessarily decrease.
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jjk166
2 hours ago
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> OK, but check this out: Say I redefine “hair color” to mean “hair color except ignoring epigenetic and embryonic stuff and pretending that no one ever goes gray or dyes their hair et cetera”. Now, hair color is 100% heritable. Amazing, right?

It seems incredibly disingenuous to lump together epigentics and hair dye when talking about heritability of hair color. We all know when we talk about inheriting hair color we're talking about natural hair color.

> his paper built a mathematical model that tries to simulate how long people would live in a hypothetical world in which no one dies from any non-aging related cause, meaning no car accidents, no drug overdoses, no suicides, no murders, and no (non-age-related) infectious disease.

Which is exactly what everyone means by lifespan in this context. No one on earth is trying to figure out how much genetics contributes to the odds of being hit by a bus.

> veryone seems to be interpreting this paper as follows:

>> Aha! We thought the heritability of lifespan was 23-35%. But it turns out that it’s around 50%. Now we know!

Which is the correct interpretation. Proper elimination of confounding factors is good science. The previous estimates were low because they weren't properly measuring what we are all referring to when we talk about lifespan.

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tptacek
2 hours ago
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This misses half the problem, which is that there aren't many intrinsic traits people care about. Your height is as biological a thing as anything else, but it's tied to your environment in the same sense as hair color. That's the point the author is making: that's it's difficult to deconfound these things, and that when we discuss "heritability", as a statistic that appears in the literature, we've always talking about confounded measures.
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jjk166
18 minutes ago
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> Your height is as biological a thing as anything else, but it's tied to your environment in the same sense as hair color.

And you wouldn't draw a distinction between the person who is short because of poor diet and the person who is short because they lost their legs in a car accident? Both are "environmental factors" which affect the distance between the top of your head and the ground, but that's not what we are referring to by height.

> we've always talking about confounded measures.

No, we haven't. It doesn't matter that confounding factors exist in the data, we can and near exclusively do talk about abstract concepts. We live in a world where there are no perfect circles, but we can talk about things having diameters. We live in a world where people die from unnatural causes, but we can still talk about people having natural lifespans. That removing confounding factors is hard doesn't change the fact we routinely make our best effort to do just that because it is necessary for discussing the abstract concept we all refer to.

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